HS-227: Visualizing Protein Data Bank Information

HS-227: Visualizing Protein Data Bank Information

HS-227: Visualizing Protein Data Bank Information : In this recorded course, students will be shown how to build and process Protein Data Bank data inside of Houdini. They will learn how to understand atomic values, visualize atomic elements, bonds between elements, information about residues and binding sites, as well as other protein information. There will also be a visual element for breaking down the different systems inside of biological proteins.
After participating in this course, students will be able to use tools to accurately produce results when it comes to producing scientific examples of proteins. They will be able to use various plugins and tools to generate results and have a better understanding of PDB.
Session 1

Breaking Down Protein Systems

In session one, we will understand the basics of what proteins are, how they create you, and the different processes inside them.

Introduction
What are Proteins?
AminoAcids, ribonucleotides, deoxyribonucleotides
Bonds, Atomic Properties, and Connections
Protein Folding and Animations
Visualization Methods for Proteins

Session 2

Working with Wireframe, Ribbon, and Spapefilling Diagrams

In session two, we will learn how to create Space-Filling, Wireframe, and Ribbon Diagrams in Houdini.

Attribute Setup
Isolate Protein Parts
Building a space-filling diagram
Visualizing Attributes
Ribbon Diagrams
Wireframe Diagrams

Session 3

Protein Animations

In session three, we will learn how to animate proteins. We will break down different charges and attributes you will need to set up to animate your proteins.

Attribute Setup
Animations through temperature factors
Animations through Charge Factors
Animations for Virus Proteins

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